STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NBM6_LEPOCUncharacterized protein. (717 aa)    
Predicted Functional Partners:
notch1
Notch receptor 1a.
    
0.951
W5MJS7_LEPOC
Notch receptor 3.
   
0.787
W5MVW5_LEPOC
Notch receptor 2.
   
0.787
rbpj
Recombination signal binding protein for immunoglobulin kappa J region b.
    
 0.674
W5NKA2_LEPOC
Uncharacterized protein.
 
 
0.644
W5NKA3_LEPOC
Uncharacterized protein.
   
0.644
maml1
Mastermind-like transcriptional coactivator 1.
    
 0.589
MAML2
Mastermind like transcriptional coactivator 2.
    
 0.587
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.580
adam10
ADAM metallopeptidase domain 10b.
    
 0.578
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.