STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NBM8_LEPOCMALT paracaspase 3. (628 aa)    
Predicted Functional Partners:
W5MRM7_LEPOC
CARD domain-containing protein.
   
 0.977
card11
Caspase recruitment domain family, member 11.
    
 0.936
W5MA94_LEPOC
Caspase recruitment domain family, member 9.
    
 0.919
W5LYQ5_LEPOC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.896
W5NF13_LEPOC
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.887
CASP8
Caspase 8; Belongs to the peptidase C14A family.
   
 0.885
W5MXT6_LEPOC
Caspase 8; Belongs to the peptidase C14A family.
   
 0.885
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
  0.884
LOC102695970
Mitogen-activated protein kinase.
    
  0.884
W5NEL3_LEPOC
Mitogen-activated protein kinase 12b.
    
  0.884
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.