STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
igbp1Immunoglobulin (CD79A) binding protein 1. (358 aa)    
Predicted Functional Partners:
ppp6c
Serine/threonine-protein phosphatase.
   
 0.996
PPP2CA
Serine/threonine-protein phosphatase.
    
 0.989
ppp2cb
Serine/threonine-protein phosphatase.
    
 0.989
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.966
tiprl
TIP41, TOR signaling pathway regulator-like (S. cerevisiae).
    
 0.956
W5N7F7_LEPOC
Regulatory associated protein of MTOR, complex 1.
    
 0.950
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.947
W5MJK6_LEPOC
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
 0.934
cct6a
Chaperonin containing TCP1, subunit 6A (zeta 1).
    
   0.904
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
 
 0.901
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.