STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102682979SERPIN domain-containing protein; Belongs to the serpin family. (406 aa)    
Predicted Functional Partners:
W5M5Y4_LEPOC
Collagen, type XXVII, alpha 1b.
    
 0.623
W5MDK5_LEPOC
Fibrillar collagen NC1 domain-containing protein.
    
 0.623
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.619
col17a1
Uncharacterized protein.
    
  0.616
fkbp10
Peptidylprolyl isomerase.
   
 
 0.612
W5M865_LEPOC
VWFA domain-containing protein.
    
 0.607
PPIC
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.558
W5MU73_LEPOC
SERPIN domain-containing protein; Belongs to the serpin family.
  
  
  0.558
W5NJW7_LEPOC
Zmp:0000000760.
    
 0.512
W5M0Z8_LEPOC
Uncharacterized protein.
   
 0.509
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.