STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eml1EMAP like 1. (868 aa)    
Predicted Functional Partners:
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.825
RANBP2
RAN binding protein 2.
   
 0.761
W5MPM7_LEPOC
Cleavage and polyadenylation specific factor 1.
   
 0.753
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.749
bub3
BUB3 mitotic checkpoint protein.
   
 0.735
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.732
taf9b
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.732
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.731
W5M3F8_LEPOC
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.731
BUB1B
BUB1 N-terminal domain-containing protein.
   
 0.730
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.