STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102689118COMM domain containing 5. (222 aa)    
Predicted Functional Partners:
COMMD10
COMM domain containing 10.
   
 0.979
W5NCJ5_LEPOC
COMM domain containing 4.
   
 0.955
W5M2L8_LEPOC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.951
LOC102696124
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.951
ENSLOCP00000017361
annotation not available
    
  0.951
ccdc22
Coiled-coil domain containing 22.
    
 0.949
commd1
Copper metabolism (Murr1) domain containing 1.
    
 0.948
commd8
COMM domain containing 8.
   
 0.940
rps27a
Ribosomal protein S27a.
    
  0.923
commd7
COMM domain containing 7.
   
 0.910
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.