STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlgn3Neuroligin 3a. (880 aa)    
Predicted Functional Partners:
nrxn1
Neurexin 1b.
    
 0.968
W5MQX3_LEPOC
Neurexin 3a.
    
 0.964
W5M3E5_LEPOC
LAM_G_DOMAIN domain-containing protein.
    
 0.958
W5M3C2_LEPOC
Uncharacterized protein.
    
 0.914
CYB5R4
Cytochrome b5 reductase 4.
     
 0.768
mdga2
MAM domain containing glycosylphosphatidylinositol anchor 2a.
    
 
 0.726
W5NKB1_LEPOC
MAM domain containing glycosylphosphatidylinositol anchor 1.
    
 
 0.717
W5NDJ6_LEPOC
UTP20 small subunit processome component.
   
 0.702
cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
   
 0.677
W5MZ39_LEPOC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.675
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.