STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102688454Si:zfos-80g12.1. (443 aa)    
Predicted Functional Partners:
SESN2
Uncharacterized protein.
  
  
 
0.791
W5NIQ5_LEPOC
Sestrin 1.
  
  
 
0.789
wdr24
WD repeat domain 24.
    
 0.768
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.763
LOC107079724
Uncharacterized protein.
    
 0.737
W5LZN7_LEPOC
Uncharacterized protein.
    
 0.737
W5M4F7_LEPOC
DEP domain containing 5.
    
 0.737
W5LZS7_LEPOC
WD repeat domain 59.
    
 0.727
nprl3
NPR3-like, GATOR1 complex subunit.
    
 0.727
W5N2W4_LEPOC
NBR1 autophagy cargo receptor b.
    
 0.710
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.