STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnga2Cyclic nucleotide gated channel alpha 2a. (679 aa)    
Predicted Functional Partners:
cngb3
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.942
W5MG81_LEPOC
Si:dkey-44k1.5.
  
0.939
cnga4
Cyclic nucleotide gated channel subunit alpha 4.
  
  
0.767
CALML6
Calmodulin like 6.
     
 0.596
W5N977_LEPOC
Calmodulin-like 4b.
     
 0.591
rcvrn
Recoverin 2.
   
 
 0.577
cnga1
Cyclic nucleotide gated channel subunit alpha 1b.
  
  
0.559
LOC102691822
Uncharacterized protein.
     
 0.559
cnga3
Cyclic nucleotide gated channel subunit alpha 3b.
  
  
0.553
W5M8Y9_LEPOC
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
    
   0.546
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.