STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NCW1_LEPOCSorting nexin 22. (190 aa)    
Predicted Functional Partners:
snx24
Sorting nexin 24.
  
 
  
0.677
WDFY4
WDFY family member 4.
      
 0.560
snx10
Sorting nexin 10b.
     
 0.550
snx11
Sorting nexin 11.
     
 0.549
W5M7C7_LEPOC
Formin binding protein 1b.
    
 
 0.539
W5LZL7_LEPOC
GTPase activating protein and VPS9 domains 1.
    
 
 0.492
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
     
 0.484
W5MUY6_LEPOC
Syntaxin 6; Belongs to the syntaxin family.
    
 0.449
W5N6V2_LEPOC
Syntaxin 8.
    
 0.449
nudt17
Nudix (nucleoside diphosphate linked moiety X)-type motif 17.
      
 0.432
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.