STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr61WD repeat domain 61. (305 aa)    
Predicted Functional Partners:
W5LX72_LEPOC
Uncharacterized protein.
    
 0.999
W5M043_LEPOC
Tetratricopeptide repeat domain 37.
    
 0.999
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.999
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.999
leo1
Uncharacterized protein.
    
 0.999
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
W5LXA7_LEPOC
DSHCT domain-containing protein.
    
 0.984
W5N6W0_LEPOC
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.982
spo11
SPO11 initiator of meiotic double stranded breaks.
    
 
 0.940
W5NH94_LEPOC
HBS1-like translational GTPase.
    
 0.937
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.