STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5ND28_LEPOCSi:ch211-153b23.3. (686 aa)    
Predicted Functional Partners:
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.781
ntpcr
Nucleoside-triphosphatase, cancer-related.
    
  0.778
aadat
Aminoadipate aminotransferase.
  
 
 0.767
hgd
Homogentisate 1,2-dioxygenase.
     
 0.766
got2
Aspartate aminotransferase.
  
 
 0.746
W5M5D0_LEPOC
4-hydroxyphenylpyruvate dioxygenase; Belongs to the 4HPPD family.
    
 0.633
hpd
4-hydroxyphenylpyruvate dioxygenase.
    
 0.633
hpdl
4-hydroxyphenylpyruvate dioxygenase-like.
    
 0.633
got1
Aspartate aminotransferase.
  
 
 0.633
LOC102689506
Glutamic-oxaloacetic transaminase 1 like 1.
  
 
 0.633
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.