STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggcxGamma-glutamyl carboxylase. (770 aa)    
Predicted Functional Partners:
LOC102696686
Vitamin K epoxide reductase complex, subunit 1.
   
 
 0.940
W5M4H7_LEPOC
NAD(P)H dehydrogenase, quinone 1.
     
 0.907
vkorc1l1
Vitamin K epoxide reductase complex, subunit 1-like 1.
     
 0.882
W5MUZ9_LEPOC
Protein S.
     
 0.853
W5MEW6_LEPOC
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
    
 0.781
LOC102698385
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
    
 0.781
LOC102694040
Uncharacterized protein.
    
 0.748
pla2g4a
Phospholipase A2.
    
 0.746
W5M4Z9_LEPOC
Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.
    
 0.628
LOC102691633
Uncharacterized protein.
    
 0.628
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.