STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NE78_LEPOCCentrosomal protein 170Aa. (1497 aa)    
Predicted Functional Partners:
W5NCX0_LEPOC
Tetratricopeptide repeat domain 41.
    
  0.526
CCDC68
Coiled-coil domain containing 68.
    
 
 0.514
W5NBR3_LEPOC
Si:ch211-169p10.1.
    
 
 0.503
W5MF23_LEPOC
Complement component 1, q subcomponent, C chain.
    
  0.498
CEP128
Centrosomal protein 128.
    
 
 0.484
cep350
Centrosomal protein 350.
  
 
 
 0.471
W5MHR5_LEPOC
Uncharacterized protein.
    
  0.430
W5MHT0_LEPOC
Uncharacterized protein.
    
  0.430
W5MU39_LEPOC
Uncharacterized protein.
    
  0.430
ints9
Integrator complex subunit 9.
    
 
 0.426
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.