STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERECatsper channel auxiliary subunit epsilon. (934 aa)    
Predicted Functional Partners:
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
  
 
 0.944
W5M5P7_LEPOC
Uncharacterized protein.
  
 
0.925
CATSPER3
Cation channel sperm associated 3.
    
 0.911
W5M075_LEPOC
Ion_trans domain-containing protein.
    
 0.853
W5NAF3_LEPOC
Uncharacterized protein.
  
 
 0.835
W5NA84_LEPOC
Ion_trans domain-containing protein.
  
 
 0.747
W5ME77_LEPOC
Ion_trans domain-containing protein.
    
 0.733
EFCAB9
EF-hand calcium binding domain 9.
  
 
 
 0.726
magi3
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.726
W5NC44_LEPOC
MAGI family member, X-linked b.
    
 0.726
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.