STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a3Solute carrier family 25 member 3b; Belongs to the mitochondrial carrier (TC 2.A.29) family. (358 aa)    
Predicted Functional Partners:
atp5f1a
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.965
LOC102687258
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
  
 0.956
ATP5F1B
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
  
 0.913
LOC102695218
Ubiquinol-cytochrome c reductase core protein 2b.
   
  
 0.913
GLO1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
   
 0.881
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 
 0.879
LOC102682364
Cytochrome c oxidase subunit 5Aa.
   
  
 0.876
W5MFS7_LEPOC
Cell division cycle associated 8.
   
  
 0.819
atp5po
ATP synthase peripheral stalk subunit OSCP.
   
    0.819
mcee
Methylmalonyl CoA epimerase.
   
 0.785
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.