W5NEG0_LEPOC protein (Lepisosteus oculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

W5NEG0_LEPOC

Cytochrome b561 family, member A3b. (262 aa)

Predicted Functional Partners:

CDYL2

0.543

cdyl

0.543

IPP

0.457

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDYL2	W5NEG0_LEPOC	ENSLOCP00000000670	ENSLOCP00000019019	Chromodomain Y like 2.	Cytochrome b561 family, member A3b.	0.543
CDYL2	cdyl	ENSLOCP00000000670	ENSLOCP00000014301	Chromodomain Y like 2.	Chromodomain protein, Y-like.	0.694
IPP	W5NEG0_LEPOC	ENSLOCP00000007056	ENSLOCP00000019019	Intracisternal A particle-promoted polypeptide.	Cytochrome b561 family, member A3b.	0.457
W5NEG0_LEPOC	CDYL2	ENSLOCP00000019019	ENSLOCP00000000670	Cytochrome b561 family, member A3b.	Chromodomain Y like 2.	0.543
W5NEG0_LEPOC	IPP	ENSLOCP00000019019	ENSLOCP00000007056	Cytochrome b561 family, member A3b.	Intracisternal A particle-promoted polypeptide.	0.457
W5NEG0_LEPOC	cdyl	ENSLOCP00000019019	ENSLOCP00000014301	Cytochrome b561 family, member A3b.	Chromodomain protein, Y-like.	0.543
cdyl	CDYL2	ENSLOCP00000014301	ENSLOCP00000000670	Chromodomain protein, Y-like.	Chromodomain Y like 2.	0.694
cdyl	W5NEG0_LEPOC	ENSLOCP00000014301	ENSLOCP00000019019	Chromodomain protein, Y-like.	Cytochrome b561 family, member A3b.	0.543