STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selenooSelenoprotein O1. (446 aa)    
Predicted Functional Partners:
LIAS
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
  0.697
W5M9I1_LEPOC
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
   
    0.688
CFI
Complement factor I; Belongs to the peptidase S1 family.
   
    0.688
W5NCX8_LEPOC
SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family.
   
    0.688
ndufs1
NADH:ubiquinone oxidoreductase core subunit S1; Belongs to the complex I 75 kDa subunit family.
 
      0.658
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
   
  
 0.611
msrb1
Methionine sulfoxide reductase B1b.
  
  
 0.606
selenok
Selenoprotein K.
      
 0.589
selenot
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.583
W5MPV3_LEPOC
Selenoprotein M.
      
 0.577
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.