STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osgepProbable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. OSGEP likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity. (350 aa)    
Predicted Functional Partners:
tp53rk
TP53 regulating kinase.
  
 0.998
tprkb
Tp53rk binding protein; Belongs to the CGI121/TPRKB family.
    
 0.998
yrdc
YrdC N(6)-threonylcarbamoyltransferase domain containing.
  
 
 0.957
acp1
LMWPc domain-containing protein.
    
  0.871
pip4p1
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
 
    
 0.868
W5NJE8_LEPOC
HGTP_anticodon domain-containing protein.
  
 
 0.707
pudp
Pseudouridine 5'-phosphatase.
    
  0.705
tbc1d23
TBC1 domain family, member 23.
    
   0.682
W5MIG3_LEPOC
Uncharacterized protein.
    
 0.672
dcakd
Dephospho-CoA kinase domain containing.
    
 0.672
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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