STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NEP0_LEPOCPiccolo presynaptic cytomatrix protein a. (4959 aa)    
Predicted Functional Partners:
rapgef4
Zgc:171558.
    
 0.936
ak9
Adenylate kinase 9.
    
  0.890
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.873
RANBP2
RAN binding protein 2.
    
 0.736
RIMS2
Regulating synaptic membrane exocytosis 2.
   
0.722
W5LZN4_LEPOC
Regulating synaptic membrane exocytosis 3.
   
0.718
W5NH40_LEPOC
Regulating synaptic membrane exocytosis 1a.
   
0.718
rab3a
RAB3A, member RAS oncogene family, b.
     
 0.648
rab3c
RAB3C, member RAS oncogene family.
     
 0.648
rab3d
RAB3D, member RAS oncogene family, b.
     
 0.648
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.