STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLHC1Clathrin heavy chain linker domain containing 1. (603 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.999
W5MIV1_LEPOC
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.998
itsn2
Intersectin 2b.
    
 0.993
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.991
clta
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.931
W5N1X4_LEPOC
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.931
gas7
Growth arrest-specific 7a.
   
 0.918
ap2b1
Adaptor related protein complex 2 subunit beta 1.
   
 0.889
ap1b1
AP complex subunit beta.
   
 0.889
W5MVZ4_LEPOC
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 0.889
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.