STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102696691Transketolase b. (625 aa)    
Predicted Functional Partners:
W5LV49_LEPOC
Transaldolase 1.
  
 0.994
W5MJC8_LEPOC
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 0.988
W5M225_LEPOC
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 0.982
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.967
rpia
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
   
 0.952
tpi1
Triosephosphate isomerase.
  
 0.951
W5MUX4_LEPOC
Xylulokinase homolog (H. influenzae).
  
 
 0.945
pgd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 
 0.938
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.923
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.923
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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