STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NEX6_LEPOCCortactin binding protein 2. (1581 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81 homolog.
    
 0.568
W5LW97_LEPOC
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.547
W5MFE5_LEPOC
Uncharacterized protein.
   
 0.547
W5MY78_LEPOC
Intraflagellar transport 88 homolog.
   
 0.545
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.542
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.538
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.533
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.527
LOC102687908
Fleer.
    
 0.526
ift80
Uncharacterized protein.
    
 0.524
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.