STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
podxlPodocalyxin-like. (403 aa)    
Predicted Functional Partners:
nphs1
NPHS1 adhesion molecule, nephrin.
    
 
 0.585
pink1
PTEN induced kinase 1.
    
 
 0.583
SLC9A3R2
SLC9A3 regulator 2.
    
 
 0.578
slc9a3r2
Uncharacterized protein.
    
 
 0.578
slc9a3r1
Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.
    
 
 0.578
W5N0D4_LEPOC
Phospholipase A2, group VI (cytosolic, calcium-independent).
      
 0.573
RIC3
RIC3 acetylcholine receptor chaperone.
    
 
 0.550
synj1
Synaptojanin 1.
    
 
 0.550
nphs2
NPHS2 stomatin family member, podocin.
    
 
 0.544
W5MM41_LEPOC
ATPase cation transporting 13A2.
    
 
 0.538
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.