STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NF52_LEPOCUncharacterized protein. (390 aa)    
Predicted Functional Partners:
chrd
Chordin; Belongs to the chordin family.
    
 
 0.627
dpp7
Dipeptidyl-peptidase 7.
     
 0.506
prcp
Prolylcarboxypeptidase (angiotensinase C).
     
 0.506
xpnpep1
X-prolyl aminopeptidase (aminopeptidase P) 1, soluble; Belongs to the peptidase M24B family.
     
 0.475
xpnpep2
X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound; Belongs to the peptidase M24B family.
     
 0.475
W5M623_LEPOC
CUB domain containing protein 2.
   
  0.451
W5MX16_LEPOC
Cubilin (intrinsic factor-cobalamin receptor).
   
  0.451
pcolce2
Procollagen C-endopeptidase enhancer 2a.
    
  0.442
W5MY26_LEPOC
Uncharacterized protein.
 
    
0.436
cltrn
Si:dkey-194e6.1.
   
 
 0.431
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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