STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdi2Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)    
Predicted Functional Partners:
rab6a
RAB6A, member RAS oncogene family.
   
 0.905
rab41
RAB41, member RAS oncogene family.
   
 0.905
W5M0R4_LEPOC
Uncharacterized protein.
   
 0.890
LOC102684782
Zgc:171927.
   
 0.890
rab1a
RAB1A, member RAS oncogene family a.
   
 0.890
rab9a
RAB9A, member RAS oncogene family.
    
 0.866
rab9b
RAB9B, member RAS oncogene family.
    
 0.866
W5NP94_LEPOC
RAB9B, member RAS oncogene family.
    
 0.866
RAB7B
RAB7B, member RAS oncogene family.
    
 0.848
rab36
RAB36, member RAS oncogene family.
   
 0.844
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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