NEFM protein (Lepisosteus oculatus) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

NEFM

Neurofilament medium; Belongs to the intermediate filament family. (812 aa)

Predicted Functional Partners:

W5MCE1_LEPOC

0.679

W5M9C1_LEPOC

0.665

grin1

0.659

W5MCC3_LEPOC

0.657

LOC102691736

0.651

LOC102690762

0.651

RYR3

0.614

W5NAB3_LEPOC

0.614

W5NIQ4_LEPOC

0.614

W5M008_LEPOC

0.544

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102690762	LOC102691736	ENSLOCP00000007956	ENSLOCP00000002452	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.858
LOC102690762	NEFM	ENSLOCP00000007956	ENSLOCP00000019293	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Neurofilament medium; Belongs to the intermediate filament family.	0.651
LOC102690762	RYR3	ENSLOCP00000007956	ENSLOCP00000015489	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Ryanodine receptor 3.	0.788
LOC102690762	W5MCC3_LEPOC	ENSLOCP00000007956	ENSLOCP00000006032	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Asp-B-Hydro_N domain-containing protein.	0.826
LOC102690762	W5MCE1_LEPOC	ENSLOCP00000007956	ENSLOCP00000006050	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Un-named hu7910.	0.912
LOC102690762	W5NAB3_LEPOC	ENSLOCP00000007956	ENSLOCP00000017572	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Ryanodine receptor 1b (skeletal).	0.788
LOC102690762	W5NIQ4_LEPOC	ENSLOCP00000007956	ENSLOCP00000020513	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Ryanodine receptor 2b (cardiac).	0.788
LOC102691736	LOC102690762	ENSLOCP00000002452	ENSLOCP00000007956	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.858
LOC102691736	NEFM	ENSLOCP00000002452	ENSLOCP00000019293	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Neurofilament medium; Belongs to the intermediate filament family.	0.651
LOC102691736	RYR3	ENSLOCP00000002452	ENSLOCP00000015489	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Ryanodine receptor 3.	0.788
LOC102691736	W5MCC3_LEPOC	ENSLOCP00000002452	ENSLOCP00000006032	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Asp-B-Hydro_N domain-containing protein.	0.826
LOC102691736	W5MCE1_LEPOC	ENSLOCP00000002452	ENSLOCP00000006050	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Un-named hu7910.	0.912
LOC102691736	W5NAB3_LEPOC	ENSLOCP00000002452	ENSLOCP00000017572	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Ryanodine receptor 1b (skeletal).	0.788
LOC102691736	W5NIQ4_LEPOC	ENSLOCP00000002452	ENSLOCP00000020513	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Ryanodine receptor 2b (cardiac).	0.788
NEFM	LOC102690762	ENSLOCP00000019293	ENSLOCP00000007956	Neurofilament medium; Belongs to the intermediate filament family.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.651
NEFM	LOC102691736	ENSLOCP00000019293	ENSLOCP00000002452	Neurofilament medium; Belongs to the intermediate filament family.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.651
NEFM	RYR3	ENSLOCP00000019293	ENSLOCP00000015489	Neurofilament medium; Belongs to the intermediate filament family.	Ryanodine receptor 3.	0.614
NEFM	W5M008_LEPOC	ENSLOCP00000019293	ENSLOCP00000001715	Neurofilament medium; Belongs to the intermediate filament family.	TPR_REGION domain-containing protein.	0.544
NEFM	W5M9C1_LEPOC	ENSLOCP00000019293	ENSLOCP00000004980	Neurofilament medium; Belongs to the intermediate filament family.	Peripherin; Belongs to the intermediate filament family.	0.665
NEFM	W5MCC3_LEPOC	ENSLOCP00000019293	ENSLOCP00000006032	Neurofilament medium; Belongs to the intermediate filament family.	Asp-B-Hydro_N domain-containing protein.	0.657