STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102695243Solute carrier family 22 member 2. (562 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
    
 0.746
slc44a1
Solute carrier family 44 member 1b; Belongs to the CTL (choline transporter-like) family.
     
 0.716
LOC102690591
MFS domain-containing protein.
  
 
0.617
LOC102695143
Solute carrier family 22 member 4.
  
 
0.616
slc22a5
Solute carrier family 22 member 21.
  
 
0.616
LOC107077642
MFS domain-containing protein.
  
 
0.611
ints9
Integrator complex subunit 9.
    
 0.608
ints1
Integrator complex subunit 1.
    
 0.596
W5M2E8_LEPOC
Integrator complex subunit 11.
    
 0.593
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.587
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.