STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lta4hLeukotriene A(4) hydrolase; Belongs to the peptidase M1 family. (618 aa)    
Predicted Functional Partners:
ltc4s
Leukotriene C4 synthase.
     
 0.904
trit1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
      0.885
CYP4F8
Cytochrome P450 family 4 subfamily F member 8; Belongs to the cytochrome P450 family.
    
 0.873
LOC102690949
Uncharacterized protein.
    
 0.709
LOC102691147
Cytochrome P450, family 4, subfamily T, polypeptide 8; Belongs to the cytochrome P450 family.
    
 0.709
W5LWZ1_LEPOC
PLAT domain-containing protein.
     
 0.706
alox5
Arachidonate 5-lipoxygenase a.
     
 0.706
alox12
Arachidonate 12-lipoxygenase.
     
 0.706
LOC102683375
Cytochrome P450, family 4, subfamily V, polypeptide 8; Belongs to the cytochrome P450 family.
    
 0.647
W5NNT2_LEPOC
Sulfite oxidase; Belongs to the cytochrome b5 family.
     
 0.597
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.