STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NFG6_LEPOCUncharacterized protein. (176 aa)    
Predicted Functional Partners:
W5N048_LEPOC
Uncharacterized protein.
   
 
 0.688
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
     
 0.561
tlr7
Toll-like receptor 7; Belongs to the Toll-like receptor family.
    
 0.525
TLR8
Toll like receptor 8; Belongs to the Toll-like receptor family.
    
 0.525
TLR8-2
Toll like receptor 8.
    
 0.525
W5M7V9_LEPOC
Uncharacterized protein.
    
 0.505
LOC102687114
Toll-like receptor 18; Belongs to the Toll-like receptor family.
    
 0.505
W5N5I5_LEPOC
Toll-like receptor 1; Belongs to the Toll-like receptor family.
    
 0.505
tlr3
Toll-like receptor 3; Belongs to the Toll-like receptor family.
    
 0.505
tlr9
Toll-like receptor 9; Belongs to the Toll-like receptor family.
    
 0.505
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.