STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD2THUMP domain containing 2. (508 aa)    
Predicted Functional Partners:
ctps1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
    0.697
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
   
    0.696
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
   
    0.696
W5NJE8_LEPOC
HGTP_anticodon domain-containing protein.
  
  
 0.613
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.561
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
    0.550
apmap
Adipocyte plasma membrane associated protein.
  
    0.550
W5NKE3_LEPOC
Zgc:194209.
  
    0.550
pus10
Pseudouridine synthase 10.
     
 0.546
abcf2
ATP-binding cassette, sub-family F (GCN20), member 2b.
  
  
 0.541
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.