Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102684734 | ccm2 | ENSLOCP00000011961 | ENSLOCP00000019483 | Mitogen-activated protein kinase kinase kinase 22. | CCM2 scaffold protein. | 0.841 |
LOC102684734 | map3k2 | ENSLOCP00000011961 | ENSLOCP00000013405 | Mitogen-activated protein kinase kinase kinase 22. | Mitogen-activated protein kinase kinase kinase 2. | 0.858 |
LOC102684734 | map3k3 | ENSLOCP00000011961 | ENSLOCP00000014419 | Mitogen-activated protein kinase kinase kinase 22. | Mitogen-activated protein kinase kinase kinase 3. | 0.859 |
W5NJI3_LEPOC | ccm2 | ENSLOCP00000020792 | ENSLOCP00000019483 | Integrin beta 1 binding protein 1. | CCM2 scaffold protein. | 0.849 |
W5NJI3_LEPOC | krit1 | ENSLOCP00000020792 | ENSLOCP00000013019 | Integrin beta 1 binding protein 1. | KRIT1 ankyrin repeat containing. | 0.970 |
W5NJI3_LEPOC | pdcd10 | ENSLOCP00000020792 | ENSLOCP00000004045 | Integrin beta 1 binding protein 1. | Programmed cell death 10b. | 0.563 |
ccm2 | LOC102684734 | ENSLOCP00000019483 | ENSLOCP00000011961 | CCM2 scaffold protein. | Mitogen-activated protein kinase kinase kinase 22. | 0.841 |
ccm2 | W5NJI3_LEPOC | ENSLOCP00000019483 | ENSLOCP00000020792 | CCM2 scaffold protein. | Integrin beta 1 binding protein 1. | 0.849 |
ccm2 | efcab2 | ENSLOCP00000019483 | ENSLOCP00000020568 | CCM2 scaffold protein. | EF-hand calcium binding domain 2. | 0.634 |
ccm2 | heg1 | ENSLOCP00000019483 | ENSLOCP00000003216 | CCM2 scaffold protein. | Heart development protein with EGF-like domains 1. | 0.576 |
ccm2 | krit1 | ENSLOCP00000019483 | ENSLOCP00000013019 | CCM2 scaffold protein. | KRIT1 ankyrin repeat containing. | 0.971 |
ccm2 | map3k2 | ENSLOCP00000019483 | ENSLOCP00000013405 | CCM2 scaffold protein. | Mitogen-activated protein kinase kinase kinase 2. | 0.841 |
ccm2 | map3k3 | ENSLOCP00000019483 | ENSLOCP00000014419 | CCM2 scaffold protein. | Mitogen-activated protein kinase kinase kinase 3. | 0.868 |
ccm2 | met | ENSLOCP00000019483 | ENSLOCP00000019200 | CCM2 scaffold protein. | MET proto-oncogene, receptor tyrosine kinase. | 0.528 |
ccm2 | mst1r | ENSLOCP00000019483 | ENSLOCP00000013339 | CCM2 scaffold protein. | Macrophage stimulating 1 receptor b. | 0.528 |
ccm2 | pdcd10 | ENSLOCP00000019483 | ENSLOCP00000004045 | CCM2 scaffold protein. | Programmed cell death 10b. | 0.967 |
efcab2 | ccm2 | ENSLOCP00000020568 | ENSLOCP00000019483 | EF-hand calcium binding domain 2. | CCM2 scaffold protein. | 0.634 |
heg1 | ccm2 | ENSLOCP00000003216 | ENSLOCP00000019483 | Heart development protein with EGF-like domains 1. | CCM2 scaffold protein. | 0.576 |
heg1 | krit1 | ENSLOCP00000003216 | ENSLOCP00000013019 | Heart development protein with EGF-like domains 1. | KRIT1 ankyrin repeat containing. | 0.906 |
heg1 | met | ENSLOCP00000003216 | ENSLOCP00000019200 | Heart development protein with EGF-like domains 1. | MET proto-oncogene, receptor tyrosine kinase. | 0.528 |
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