STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhdc3Kelch domain containing 3. (383 aa)    
Predicted Functional Partners:
rrp36
Ribosomal RNA processing 36.
 
    
 0.876
cul2
Cullin 2; Belongs to the cullin family.
    
 
 0.784
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
   0.737
ubxn7
UBX domain protein 7.
    
   0.667
LOC102689299
Transmembrane protein 264.
      
 0.578
mea1
Male-enhanced antigen 1.
      
 0.553
spata4
Spermatogenesis associated 4.
      
 0.534
SFI1
SFI1 centrin binding protein.
      
 0.497
zmynd10
Zinc finger MYND domain-containing protein 10; Plays a role in axonemal structure organization and motility. Involved in axonemal pre-assembly of inner and outer dynein arms (IDA and ODA, respectively) for proper axoneme building for cilia motility. May act by indirectly regulating transcription of dynein proteins. Belongs to the ZMYND10 family.
      
 0.482
mrpl2
Mitochondrial ribosomal protein L2.
   
  
 0.423
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.