STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl7l1Ribosomal protein L7-like 1. (259 aa)    
Predicted Functional Partners:
W5M2L8_LEPOC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
LOC102696124
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
ENSLOCP00000017361
annotation not available
   
 0.999
W5MB44_LEPOC
Ribosomal protein L5b.
  
 0.998
W5MCK3_LEPOC
Ribosomal protein L35.
  
 0.998
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.998
rpl19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.998
RPL7A
Ribosomal protein L7a.
  
 0.997
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.997
W5LYG6_LEPOC
Ribosomal protein L14.
  
 0.997
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.