STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NG33_LEPOCLamin B receptor. (575 aa)    
Predicted Functional Partners:
LOC102693705
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 0.993
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.986
msmo1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.951
W5MSU6_LEPOC
Squalene epoxidase a.
   
 
 0.950
W5M481_LEPOC
Phosphoethanolamine methyltransferase.
   
 
 0.942
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 
 0.942
W5N3N4_LEPOC
Sigma non-opioid intracellular receptor 1.
   
 
 0.942
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.934
dhcr24
24-dehydrocholesterol reductase.
 
 
 0.927
ebp
EBP cholestenol delta-isomerase.
   
 
 0.926
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.