STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NG34_LEPOCUncharacterized protein. (89 aa)    
Predicted Functional Partners:
spcs2
Signal peptidase complex subunit 2.
   
 0.893
spcs1
Signal peptidase complex subunit 1.
   
 0.883
spcs3
Signal peptidase complex subunit 3.
   
 0.879
W5NAD3_LEPOC
Kaptin (actin binding protein).
    
 0.840
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.833
W5LZS7_LEPOC
WD repeat domain 59.
    
 0.779
wdr24
WD repeat domain 24.
    
 0.779
W5NA75_LEPOC
NPR2 like, GATOR1 complex subunit.
    
 0.755
immp1l
Mitochondrial inner membrane protease subunit.
    
 0.717
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.679
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.