STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnih3Cornichon family AMPA receptor auxiliary protein 3. (160 aa)    
Predicted Functional Partners:
gria2
Glutamate receptor, ionotropic, AMPA 2b.
    
 0.951
gria4
Glutamate receptor, ionotropic, AMPA 4a.
    
 0.842
LOC102693889
Glutamate receptor, ionotropic, AMPA 1b.
    
 0.842
gria3
Glutamate receptor, ionotropic, AMPA 3a.
   
 0.842
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.761
tmed2
Transmembrane p24 trafficking protein 2.
    
 0.699
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
  
  
0.696
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
   
  0.669
uso1
USO1 vesicle transport factor.
    
  0.668
stx17
Syntaxin 17; Belongs to the syntaxin family.
    
 0.666
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.