Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102693253 | W5M994_LEPOC | ENSLOCP00000002199 | ENSLOCP00000004953 | POU domain protein. | PR domain containing 14. | 0.745 |
LOC102693253 | foxp2 | ENSLOCP00000002199 | ENSLOCP00000019623 | POU domain protein. | Forkhead box P2. | 0.479 |
LOC102695885 | foxp2 | ENSLOCP00000007861 | ENSLOCP00000019623 | RAR-related orphan receptor C a. | Forkhead box P2. | 0.540 |
LOC102695885 | rora | ENSLOCP00000007861 | ENSLOCP00000018200 | RAR-related orphan receptor C a. | RAR-related orphan receptor A, paralog a. | 0.807 |
LOC102695885 | rorb | ENSLOCP00000007861 | ENSLOCP00000011862 | RAR-related orphan receptor C a. | RAR-related orphan receptor B. | 0.807 |
W5M994_LEPOC | LOC102693253 | ENSLOCP00000004953 | ENSLOCP00000002199 | PR domain containing 14. | POU domain protein. | 0.745 |
W5M994_LEPOC | foxp2 | ENSLOCP00000004953 | ENSLOCP00000019623 | PR domain containing 14. | Forkhead box P2. | 0.494 |
cbfb | foxp2 | ENSLOCP00000009612 | ENSLOCP00000019623 | Core-binding factor subunit beta. | Forkhead box P2. | 0.637 |
cbfb | runx1 | ENSLOCP00000009612 | ENSLOCP00000013480 | Core-binding factor subunit beta. | Runt-related transcription factor. | 0.969 |
cbfb | runx2 | ENSLOCP00000009612 | ENSLOCP00000019471 | Core-binding factor subunit beta. | RUNX family transcription factor 2a. | 0.969 |
cbfb | runx3 | ENSLOCP00000009612 | ENSLOCP00000003232 | Core-binding factor subunit beta. | Runt-related transcription factor. | 0.969 |
foxp2 | LOC102693253 | ENSLOCP00000019623 | ENSLOCP00000002199 | Forkhead box P2. | POU domain protein. | 0.479 |
foxp2 | LOC102695885 | ENSLOCP00000019623 | ENSLOCP00000007861 | Forkhead box P2. | RAR-related orphan receptor C a. | 0.540 |
foxp2 | W5M994_LEPOC | ENSLOCP00000019623 | ENSLOCP00000004953 | Forkhead box P2. | PR domain containing 14. | 0.494 |
foxp2 | cbfb | ENSLOCP00000019623 | ENSLOCP00000009612 | Forkhead box P2. | Core-binding factor subunit beta. | 0.637 |
foxp2 | nfatc2 | ENSLOCP00000019623 | ENSLOCP00000002781 | Forkhead box P2. | Nuclear factor of activated T cells 2a. | 0.605 |
foxp2 | rora | ENSLOCP00000019623 | ENSLOCP00000018200 | Forkhead box P2. | RAR-related orphan receptor A, paralog a. | 0.540 |
foxp2 | rorb | ENSLOCP00000019623 | ENSLOCP00000011862 | Forkhead box P2. | RAR-related orphan receptor B. | 0.540 |
foxp2 | runx1 | ENSLOCP00000019623 | ENSLOCP00000013480 | Forkhead box P2. | Runt-related transcription factor. | 0.585 |
foxp2 | runx2 | ENSLOCP00000019623 | ENSLOCP00000019471 | Forkhead box P2. | RUNX family transcription factor 2a. | 0.585 |
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