STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekPleckstrin. (353 aa)    
Predicted Functional Partners:
LOC102694223
Hyaluronidase.
      
 0.613
W5MDD1_LEPOC
Glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, a.
    
 
 0.505
LOC102682921
Regulator of G protein signaling 18.
   
  
 0.487
tln1
Talin 1.
     
 0.464
cdc42
Cell division cycle 42.
   
 
 0.452
W5N575_LEPOC
Talin rod domain containing 1.
     
 0.445
tln2
Talin 2a.
     
 0.445
tagln3
Transgelin; Belongs to the calponin family.
     
 0.439
TAGLN
Transgelin; Belongs to the calponin family.
     
 0.439
W5LZI8_LEPOC
Fermitin family member 3b.
   
  
 0.426
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.