STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp3r1Protein phosphatase 3, regulatory subunit B, alpha a. (169 aa)    
Predicted Functional Partners:
nfatc1
Nuclear factor of activated T cells 1.
    
 0.992
W5N4D7_LEPOC
Serine/threonine-protein phosphatase.
   
 0.991
wdr92
WD repeat domain 92.
 
  
 0.991
PPP3CA
Serine/threonine-protein phosphatase.
   
 0.986
ppp3cc
Serine/threonine-protein phosphatase.
   
 0.986
PPP3CB
Serine/threonine-protein phosphatase.
   
 0.978
nfatc3
Nuclear factor of activated T cells 3a.
    
 0.946
LOC102690502
Peptidylprolyl isomerase.
   
 0.930
fkbp1b
Peptidylprolyl isomerase.
   
 0.930
nfatc2
Nuclear factor of activated T cells 2a.
    
 0.929
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.