STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stxbp5Syntaxin binding protein 5a (tomosyn). (1230 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.921
W5LZX4_LEPOC
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.890
stx4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.890
stx1b
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.890
stx2
Syntaxin 2b; Belongs to the syntaxin family.
    
 0.890
W5NHL5_LEPOC
Syntaxin 11b, tandem duplicate 2.
    
 0.889
LOC102682483
Syntaxin 11a; Belongs to the syntaxin family.
    
 0.889
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.880
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.880
LOC102685791
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.877
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.