STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrb3Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. (202 aa)    
Predicted Functional Partners:
msra
PMSR domain-containing protein.
 
 0.975
LOC102692343
PMSR domain-containing protein.
 
 0.973
W5N793_LEPOC
Thioredoxin; Belongs to the thioredoxin family.
   
 0.771
W5MTQ7_LEPOC
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.706
W5N0B4_LEPOC
Uncharacterized protein; Belongs to the NDK family.
  
 0.706
fxn
Frataxin.
    
 
 0.622
cat
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.617
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.611
mrpl4
Mitochondrial ribosomal protein L4.
    
 
 0.609
W5MQY4_LEPOC
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.608
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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