ddx43 protein (Lepisosteus oculatus) - STRING interaction network

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Score

ddx43

DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family. (677 aa)

Predicted Functional Partners:

sf3b1

0.738

rbm8a

0.725

RANBP2

0.708

magoh

0.703

patl1

0.699

lsm7

0.688

nop58

0.677

pes1

0.664

prpf6

0.664

sf3b3

0.637

Your Current Organism:

Lepisosteus oculatus

NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RANBP2	ddx43	ENSLOCP00000012667	ENSLOCP00000019926	RAN binding protein 2.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	0.708
RANBP2	magoh	ENSLOCP00000012667	ENSLOCP00000007374	RAN binding protein 2.	Mago homolog, exon junction complex subunit.	0.983
RANBP2	nop58	ENSLOCP00000012667	ENSLOCP00000012525	RAN binding protein 2.	NOP58 ribonucleoprotein homolog (yeast).	0.567
RANBP2	rbm8a	ENSLOCP00000012667	ENSLOCP00000011071	RAN binding protein 2.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.983
RANBP2	sf3b1	ENSLOCP00000012667	ENSLOCP00000004663	RAN binding protein 2.	Splicing factor 3b, subunit 1.	0.643
RANBP2	sf3b3	ENSLOCP00000012667	ENSLOCP00000009184	RAN binding protein 2.	Splicing factor 3b, subunit 3.	0.549
ddx43	RANBP2	ENSLOCP00000019926	ENSLOCP00000012667	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	RAN binding protein 2.	0.708
ddx43	lsm7	ENSLOCP00000019926	ENSLOCP00000005203	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.688
ddx43	magoh	ENSLOCP00000019926	ENSLOCP00000007374	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	Mago homolog, exon junction complex subunit.	0.703
ddx43	nop58	ENSLOCP00000019926	ENSLOCP00000012525	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	NOP58 ribonucleoprotein homolog (yeast).	0.677
ddx43	patl1	ENSLOCP00000019926	ENSLOCP00000000802	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	PAT1 homolog 1, processing body mRNA decay factor.	0.699
ddx43	pes1	ENSLOCP00000019926	ENSLOCP00000004713	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.664
ddx43	prpf6	ENSLOCP00000019926	ENSLOCP00000005808	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).	0.664
ddx43	rbm8a	ENSLOCP00000019926	ENSLOCP00000011071	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.725
ddx43	sf3b1	ENSLOCP00000019926	ENSLOCP00000004663	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	Splicing factor 3b, subunit 1.	0.738
ddx43	sf3b3	ENSLOCP00000019926	ENSLOCP00000009184	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	Splicing factor 3b, subunit 3.	0.637
lsm7	ddx43	ENSLOCP00000005203	ENSLOCP00000019926	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family.	0.688
lsm7	patl1	ENSLOCP00000005203	ENSLOCP00000000802	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	PAT1 homolog 1, processing body mRNA decay factor.	0.999
lsm7	prpf6	ENSLOCP00000005203	ENSLOCP00000005808	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).	0.984
lsm7	sf3b1	ENSLOCP00000005203	ENSLOCP00000004663	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Splicing factor 3b, subunit 1.	0.965