STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rap1bRAP1B, member of RAS oncogene family. (185 aa)    
Predicted Functional Partners:
rapgef4
Zgc:171558.
    
 0.966
krit1
KRIT1 ankyrin repeat containing.
    
 0.965
rapgef2
Si:dkey-253i9.4.
   
 0.954
W5MLR3_LEPOC
Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein.
    
 0.940
itsn2
Intersectin 2b.
    
 0.926
W5NFI2_LEPOC
Afadin, adherens junction formation factor a.
    
 0.911
SHANK3
SH3 and multiple ankyrin repeat domains 3a.
   
 0.895
raf1
Raf-1 proto-oncogene, serine/threonine kinase b.
   
 0.885
braf
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.885
rap1gap
RAP1 GTPase activating protein.
    
 0.882
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.