STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NH40_LEPOCRegulating synaptic membrane exocytosis 1a. (1698 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
   
 0.979
UNC13B
Unc-13 homolog B.
    
0.837
W5MG77_LEPOC
Uncharacterized protein.
    
0.837
UNC13C
Unc-13 homolog C.
    
0.837
rapgef4
Zgc:171558.
    
 0.801
TSPOAP1
TSPO associated protein 1.
    
 0.762
W5MGR1_LEPOC
RIMS binding protein 2.
    
 0.762
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.723
W5NEP0_LEPOC
Piccolo presynaptic cytomatrix protein a.
   
0.718
slc18a3
Solute carrier family 18 member 3b.
     
 0.678
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.