STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpmCarboxypeptidase M. (480 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
  0.977
yeats4
YEATS domain containing 4.
      
 0.560
W5MEF0_LEPOC
Peptidase_M14 domain-containing protein.
 
  
  
0.519
cpo
Carboxypeptidase O.
  
  
 0.433
LOC102685663
Carboxypeptidase A1 (pancreatic).
  
  
 0.423
LOC102685329
Uncharacterized protein.
  
  
 0.415
W5LWQ4_LEPOC
Uncharacterized protein.
   
 
  0.412
W5M9Z8_LEPOC
AP-1 complex subunit gamma.
   
 
  0.412
PREP
Prolyl endopeptidase.
      
 0.410
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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