STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iydIodotyrosine deiodinase. (292 aa)    
Predicted Functional Partners:
rfk
Riboflavin kinase.
    
 0.936
metap1d
Methionyl aminopeptidase type 1D (mitochondrial); Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
  
 
 0.933
W5NJ40_LEPOC
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.925
uros
Uroporphyrinogen III synthase.
  
 
 0.914
LOC102687258
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
  
 
 0.898
rnaseh1
Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
 0.894
W5LWH0_LEPOC
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
 0.892
W5M9X2_LEPOC
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
 0.892
sugct
Succinyl-CoA:glutarate-CoA transferase.
   
 
 0.886
amacr
Alpha-methylacyl-CoA racemase.
   
 
 0.886
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.