STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5NHK3_LEPOCOtogelin-like. (2789 aa)    
Predicted Functional Partners:
W5NM01_LEPOC
Uncharacterized protein.
    
 0.863
W5M2L8_LEPOC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.812
LOC102696124
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.812
ENSLOCP00000017361
annotation not available
   
  0.812
LOC102691956
Si:ch211-237i5.4.
    
 0.742
W5MFH7_LEPOC
GLE1 RNA export mediator.
    
 0.741
W5NNN0_LEPOC
Glycoprotein Ib platelet subunit beta.
   
 0.734
LOC102691479
Glycoprotein IX (platelet).
   
 0.722
GP5
Glycoprotein V platelet.
    
 0.709
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.694
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.