STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem214Transmembrane protein 214. (689 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.677
CKAP4
Cytoskeleton associated protein 4.
    
 
 0.570
tmem70
Transmembrane protein 70.
      
 0.560
rhbdd1
Rhomboid domain containing 1.
      
 0.549
wfs1
Wolfram syndrome 1b (wolframin).
      
 0.545
klhl31
Kelch-like family member 31.
      
 0.545
trmt11
tRNA methyltransferase 11 homolog.
      
 0.542
exd2
Exonuclease 3'-5' domain containing 2.
      
 0.539
cnot2
CCR4-NOT transcription complex, subunit 2.
      
 0.532
mogs
Mannosyl-oligosaccharide glucosidase.
   
  
 0.525
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.