STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhoqRas homolog family member Q. (207 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2b.
    
 0.998
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.971
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.883
trip10
Thyroid hormone receptor interactor 10b.
    
 0.858
rapgef1
Rap guanine nucleotide exchange factor (GEF) 1a.
    
 0.853
myo9b
Myosin IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.841
arhgdig
Rho GDP dissociation inhibitor (GDI) gamma.
   
 0.841
arhgdia
Rho GDP dissociation inhibitor (GDI) alpha.
   
 0.841
myo9a
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.841
W5NJB2_LEPOC
Uncharacterized protein.
   
  0.825
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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